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Table 1 Primers used for reverse transcription, PCR and sequencing. Primer names generally indicate approximate binding positions in the NoVs genome

From: Identification of two divergent swine Noroviruses detected at the slaughterhouse in North East Italy

Primer

Sequence (5′-3′)

Genome Position (nt)

Amplicon size

NORP7F

GAAGATGGCGTCTAACGACG

7–27

539 bp

NORP_546R

TGAGGGACATGCACCACTC

527–546

NORP_374F

GAACCACTCCCAGGCTCTAT

374–394

876 bp

NORP_1250R

CCTCCATGTCTAGAACAGCA

1230–1250

NORP1085F

CGCATGTTCACTTCAGCAGC

1085–1105

951 bp

NORP2036R

CCCTTYCCATAAGGGGTGTT

2016–2036

NORP3127F

CTTTTGATYACCACCACTCATGT

3127–3150

1191 bp

NORP4318R

TCTGTTGGGTGGAGTCCCA

4299–4318

NORP3819F

GAAACCATAGTGAATTTTCTAG

3819–3841

540 bp

NORP4359R

CAGCAGAGAATTTCACCATG

4339–4359

NORP4051F

TGAARGATGARCTTGTSAAGAC

4051–4073

1087 bp

NORP5138R

TTGACCTCTGGTACGAGACC

5118–5138

NVG4F

TGGATGCGRTTCTCNGACYT

5007–5027

1821 bp

NORP5647F

CGAACAATGCTGGGGATGATGTTT

5647–5671

NORP6828R

TGATTAAKKGCATTRGYACCAGCA

6804–6828

NORP6579F

CACCACAGGTAGAGTGCTC

6579–6598

1071 bp

NORP7650R

TTTTTTTGGAGATCAGGGAACAG

7627–7650