Table 1 Summary of the prevalence’s and case reports of swine respiratory pathogens in Africa
From: Status and gaps of research on respiratory disease pathogens of swine in Africa
| Pathogen reported | Country | Prevalence (%) | Sample size | Diagnostic method(s) | Year of public. | References |
|---|---|---|---|---|---|---|
| PRRSv | Uganda | 1.5 | 522 | ELISA | 2018 | Dione et al. 2018 [41] |
| South Africa South Africa | NA NA | NA NA | - - | 2004 2005 | OIE, 2004 [42] OIE, 2005 [43] | |
| Nigeria | 53.8 | 368 | ELISA | 2018 | Aiki-Raji et al. 2018a [44] | |
| Nigeria | 1.4 | 221 | RT-qPCR | 2014 | Meseko and Oluwayelu, 2014 [45] | |
| PCV2 | South Africa | 15.9 | 339 | PCR, sequencing | 2017 2004 | Afolabi et al. 2017b [46] Drew et al. 2004 [47] |
| Nigeria | 1.4 | 364 | ELISA | 2018 | Aiki-Raji et al. 2018b [48] | |
| Uganda | 12.0 | 25 | IHC, PCR | 2013 | Ojok et al. 2013 [49] | |
| Uganda | 77.0 | 91 | RT-PCR | 2013 | Jonsson, 2013 [50] | |
| Mozambique | 54.0 | 111 | PCR, sequencing | 2018 | Laisse et al. 2018 [51] | |
| Uganda | 25.0 | 25 | IHC, PCR | 2018 | Eneku et al. 2018 [52] | |
| Uganda | 4.2 | 522 | ELISA | 2018 | Dione et al. 2018 [41] | |
| Swine influenza A | Nigeria | 8.0 | 75 | ELISA | 2015 | Adeola et al. 2015 [53] |
| Ghana | 10.0 | 50 | ELISA | 2015 | Adeola et al. 2015 [53] | |
| Togo Ivory Coast Benin | 2.5–12.3 0 0 | 325 498 1112 | RT-qPCR RT-PCR RT-PCR | 2012 2009–10 2009–10 | Ducatez et al. 2016 [54] Couacy-hymann et al. 2012 [55] Couacy-hymann et al. 2012 [55] | |
| Nigeria | 14.0 | 50 | HI | 2009 | Adeola et al. 2009 [56] | |
| Uganda Egypt Egypt Egypt | 4.9 1.67–4.6 2–4 6–45 | 522 240 93 - | ELISA HI, RT-PCR HI, ELISA ELISA | 2018 2010 2013 2018 | Dione et al. 2018 [41] El-Sayed et al. 2010 [57] El-Sayed et al. 2013 [58] Gomaa et al. 2018 [59] | |
| Uganda | 1.4 | 511 | RT-PCR | 2014 | Kirunda et al., 2014 [60] | |
| Kenya Kenya Nigeria | 16.9 15.9 33.3 | 759 1084 129 | ELISA ELISA RT-qPCR | 2015 2018 2018 | Munyua, 2015 [61] Munyua et al. 2018 [62] Meseko et al. 2018 [63] | |
| Cameroon | 2.0 | 104 | RT-PCR | 2012 | Njabo et al. 2012 [64] | |
| Nigeria | 13.7 | 227 | RT-qPCR, HI | 2014 | Meseko et al., 2014 [65] | |
| APP | Uganda | 22.8 | 522 | ELISA | 2018 | Dione et al. 2018 [41] |
| M. hyopneumoniae | Uganda | 9.9 | 522 | ELISA | 2018 | Dione et al. 2018 [41] |
