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Table 3 The 37 DEGs with great fold changes between XS and XL groups

From: Differences in gene expression and variable splicing events of ovaries between large and small litter size in Chinese Xiang pigs

Gene_ID

Gene symbol

Readcount -XS

Readcount -XL

log2FC

Pvalue

Padj

Description

ENSSSCG00000018081

ATP6

304.543

6356.744

4.384

8.7737E-25

5.28171E-23

ATP synthase F0 subunit 6

ENSSSCG00000034942

StAR

47.920

4106.007

6.420

3.4925E-30

3.60421E-28

steroidogenic acute regulatory protein

ENSSSCG00000025273

CYP11A1

95.654

2902.591

4.923

6.4979E-26

4.61379E-24

cytochrome P450 family 11 subfamily A member 1

ENSSSCG00000010400

MSMB

29.237

2419.602

6.370

1.84815E-12

2.71985E-11

microseminoprotein beta

ENSSSCG00000012277

TIMP1

46.398

2402.269

5.695

2.1928E-34

2.96206E-32

TIMP metallopeptidase inhibitor 1

ENSSSCG00000009759

SCARB1

111.493

2083.499

4.224

5.39056E-13

8.60367E-12

scavenger receptor class B member 1

ENSSSCG00000006719

HSD3B

124.329

2015.189

4.019

8.923E-14

1.56553E-12

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1

ENSSSCG00000005216

RLN2

2.618

1665.513

9.313

1.1897E-12

1.8052E-11

relaxin 2

ENSSSCG00000039548

PTGFR

46.064

1086.103

4.559

5.30226E-14

9.52401E-13

prostaglandin F receptor

ENSSSCG00000026724

PLBD1

45.017

939.753

4.384

4.86394E-07

2.93018E-06

phospholipase B domain containing

ENSSSCG00000025698

SERPINE1

46.572

859.301

4.206

1.66233E-14

3.20042E-13

serpin family E member 1

ENSSSCG00000029066

IDI1

40.651

690.156

4.086

8.64835E-15

1.73962E-13

isopentenyl-diphosphate delta isomerase 1

ENSSSCG00000011747

CLDN11

33.833

597.989

4.142

9.07434E-17

2.3339E-15

claudin 11

ENSSSCG00000009645

ADAMDEC1

23.491

541.132

4.525

1.24429E-14

2.45241E-13

ADAM like decysin 1

ENSSSCG00000008857

MSMO1

27.915

479.635

4.102

5.36737E-14

9.63054E-13

methylsterol monooxygenase 1

ENSSSCG00000031321

NR4A1

10.930

473.535

5.437

8.68239E-20

3.10901E-18

nuclear receptor subfamily 4 group A member 1

ENSSSCG00000011727

PTX3

11.869

423.841

5.158

1.30294E-15

2.87494E-14

pentraxin 3

ENSSSCG00000036956

SOCS3

19.526

386.909

4.308

1.15405E-14

2.28814E-13

suppressor of cytokine signaling 3

ENSSSCG00000011683

PAQR9

4.394

379.387

6.431

9.82346E-11

1.11946E-09

progestin and adipoQ receptor family member 9

ENSSSCG00000006359

ADAMTS4

6.917

327.492

5.565

8.02685E-11

9.22311E-10

ADAM metallopeptidase with thrombospondin type 1 motif 4

ENSSSCG00000003753

PDZK1IP1

3.444

324.231

6.556

2.27989E-10

2.45339E-09

PDZK1 interacting protein 1

ENSSSCG00000021576

CD83

15.939

270.330

4.085

3.01992E-20

1.15613E-18

CD83 molecule

ENSSSCG00000002013

DHRS4

14.232

269.853

4.245

2.07358E-07

1.35533E-06

dehydrogenase/reductase (SDR family) member 4

ENSSSCG00000015268

FMO1

11.718

234.182

4.320

1.17801E-12

1.79072E-11

flavin containing dimethylaniline monoxygenase 1

ENSSSCG00000023298

SRXN1

10.211

218.387

4.417

4.42571E-24

2.48423E-22

sulfiredoxin 1

ENSSSCG00000009062

MGARP

6.837

160.851

4.559

2.91204E-13

4.79996E-12

mitochondria localized glutamic acid rich protein

ENSSSCG00000006791

OVGP1

7.036

156.771

4.478

5.01106E-06

2.48682E-05

oviductal glycoprotein 1

ENSSSCG00000008963

AREG

0.134

149.218

9.298

9.88649E-15

1.97433E-13

amphiregulin

ENSSSCG00000004521

MRO

0.401

145.096

8.434

5.4203E-10

5.46802E-09

maestro

ENSSSCG00000009219

IBSP

0.000

111.713

9.293

2.52194E-06

1.32225E-05

integrin binding sialoprotein

ENSSSCG00000028691

novel gene

1.780

109.434

5.936

2.32844E-15

5.01127E-14

sulfotransferase 1C1

ENSSSCG00000040843

MRAP

5.782

106.633

4.203

1.09225E-08

8.92657E-08

melanocortin 2 receptor accessory protein

ENSSSCG00000034167

SLC5A3

476.186

26.881

-4.145

4.07214E-26

2.91632E-24

solute carrier family 5 member 3

ENSSSCG00000026113

ZBTB20

197.303

5.575

-5.189

2.60958E-68

2.16791E-65

zinc finger and BTB domain containing 20

ENSSSCG00000033672

HIST1H1E

215.637

1.255

-7.490

2.04215E-39

4.03933E-37

histone cluster 1 H1 family member e

ENSSSCG00000034598

HIST2H2AC

121.487

0.706

-7.351

2.08391E-27

1.64877E-25

histone cluster 2 H2A family member c

ENSSSCG00000035473

novel gene

110.429

0.167

-8.751

1.51499E-27

1.21017E-25

histone H4