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Table 7 The detection of eleven hub genes and the protein-protein network

From: Differences in gene expression and variable splicing events of ovaries between large and small litter size in Chinese Xiang pigs

No. Gene in node1 Combined gene numbers Genes in the node 2
1 COX1 35 AICDA,ATP6,ATP8,CAT,COX17,COX18,COX2,COX3,COX5A,COX5B,COX6A1,CYCS,CYTB,EXO1,HFM1,HSPA9,HSPD1,MRPS7,MT-ND2,ND1,ND3,ND4,ND4L,ND5,ND6,NDUFS2,NRF1,PNOC,POLD1,RAG2,REEP5,SDHC,SOD2,TCTP,UBC
2 COX3 23 AICDA,ATP6,ATP8,COX1,COX2,COX5A,COX5B,COX6A1,CYCS,CYTB,HIGD1A,MT-ND2,ND1,ND3,ND4,ND4L,ND5,ND6,NDUFS2,PNOC,RPS12,SDHC,SOD2
3 CYP11A1 17 AR,CEL,CYB5A,CYP21A2,DHCR24,DHRS11,FSHR,GNRH1,HSD11B2,HSD17B1,HSD17B6,HSD17B7,HSD3B1,LIPA,SCARB1,SOAT1,STAR
4 DHRS4 20 ACOT4,ALDH1A1,ALDH1A2,ARHGAP11A,CAT,CYB5A,CYTH4,DAO1,ECH1,EPHX2,GSTO2,HSD17B2,HSD17B4,IDH1,KIF4A,PECR,RDH12,RDH16,RETSAT,STX12
5 HSD3B1 20 CYB5A,CYP11A1,CYP21A2,CYP51,DHCR7,DHRS11,FDFT1,FSHR,HSD11B2,HSD17B1,HSD17B2,HSD17B4,HSD17B6,HSD17B7,LSS,MSMO1,SC5D,SQLE,STAR,TM7SF2
6 MSMO1 25 ACAT1,ACAT2,COL6A5,CPOX,CYB5A,CYP51,DHCR24,DHCR7,FDFT1,FDPS,HMGCR,HMGCS1,HSD17B12,HSD17B7,HSD3B1,INSIG1,LSS,MVK,NSDHL,SC5D,SCD,SCD5,SQLE,STARD4,TM7SF2
7 NR4A1 13 AR,ATF3,DUSP1,EGR1,EGR2,FOS,GRASP,MAPK3,NOR-1,PCK1,RPS6KA3,RTN4,VEGFA
8 PTX3 20 ARMC8,ASAH1,C1QA,C1QC,CEP290,CFP,CST3,CSTB,CTSH,CTSZ,F3,GGH,IDH1,NEU1,QPCT,SELP,TIMP2,TNFAIP6,VEGFA,YPEL5
9 RLN 12 ADCY4,ADCY9,ADM,ADORA2B,ADRB1,FSHR,HTR4,KIAA1109,PTHLH,RAMP2,RLF,RXFP4
10 SCARB1 16 ABCA1,ABCG5,APOA1,CD63,CD81,CD82,CYP11A1,EPHA2,HMGCR,LDLR,OLR1,PLTP,PPARA,PPARG,STAR,TSPAN3
11 STAR 17 ADCY9,AR,CYP11A1,CYP21A2,DHRS11,FSHR,GBA,GBI1,GNRH1,HSD17B1,HSD17B6,HSD3B1,SCARB1,STARD4,TSPO2,UGT8,VDAC1